euL1db
The European database of L1-HS retrotransposon insertions in humans

Home Background Search Browse Utilities Help FAQ Data Contact
Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

143 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip1808 chr1 75192898 75192898 - unknown germline . no 224 CRYZ
srip2396 chr1 90914505 90914505 + unknown germline . no 224 .
srip4020 chr1 149026812 149026812 . unknown germline . no 224 NBPF17P
srip4128 chr1 149308428 149308428 + unknown germline . no 224 LOC645262
srip5424 chr1 179575369 179575369 - unknown germline . no 224 TDRD5
srip5584 chr1 185045429 185045429 - unknown germline . no 224 RNF2
srip6856 chr1 221827812 221827812 - unknown germline . no 224 .
srip7080 chr1 231007802 231007802 . unknown germline . no 224 .
srip7216 chr1 237449858 237449858 . unknown germline . no 224 RYR2
srip7386 chr1 242311569 242311569 + unknown germline . no 224 PLD5
srip8450 chr10 25707693 25707693 - unknown germline . no 224 GPR158
srip9536 chr10 68803690 68803690 + unknown germline . no 224 LRRTM3;CTNNA3
srip13811 chr11 33670130 33670130 + unknown germline . no 224 C11orf41
srip14260 chr11 41831805 41831805 - unknown germline . no 224 .
srip15376 chr11 58171843 58171843 + unknown germline . no 224 .
srip17673 chr11 104556129 104556129 - unknown germline . no 224 .
srip18231 chr11 112084613 112084613 + unknown germline . no 224 BCO2
srip18472 chr11 123241792 123241792 + unknown germline . no 224 .
srip19257 chr11 134305645 134305645 - unknown germline . no 224 .
srip19606 chr12 8105592 8105592 + unknown germline . no 224 .
srip19908 chr12 11219195 11219195 - unknown germline . no 224 PRH1-PRR4
srip20124 chr12 12933687 12933687 - unknown germline . no 224 APOLD1
srip20379 chr12 24868709 24868709 - unknown germline . no 224 .
srip20467 chr12 25775847 25775847 - unknown germline . no 224 IFLTD1
srip20734 chr12 28226418 28226418 - unknown germline . no 224 .
srip22238 chr12 43256979 43256979 - unknown germline . no 224 .
srip24623 chr12 84965140 84965140 + unknown germline . no 224 .
srip25148 chr12 95965088 95965088 . unknown germline . no 224 .
srip27363 chr13 27488117 27488117 + unknown germline . no 224 .
srip27855 chr13 38742100 38742100 + unknown germline . no 224 .
srip29644 chr13 61734491 61734491 . unknown germline . no 224 .
srip30963 chr13 79259790 79259790 - unknown germline . no 224 .
srip31557 chr13 85871605 85871605 - unknown germline . no 224 .
srip33537 chr13 104296230 104296230 - unknown germline . no 224 .
srip35201 chr14 28301256 28301256 + unknown germline . no 224 .
srip35852 chr14 36674749 36674749 + unknown germline . no 224 .
srip36314 chr14 39875089 39875089 + unknown germline . no 224 FBXO33
srip37165 chr14 52667762 52667762 - unknown germline . no 224 .
srip37334 chr14 59220393 59220393 + unknown germline . no 224 .
srip38142 chr14 71197789 71197789 + unknown germline . no 224 MAP3K9
srip38303 chr14 76195802 76195802 + unknown germline . no 224 TTLL5
srip38769 chr14 86862665 86862665 - unknown germline . no 224 .
srip39518 chr15 34031845 34031845 - unknown germline . no 224 RYR3
srip39738 chr15 37707890 37707890 - unknown germline . no 224 .
srip41593 chr15 61328966 61328966 - unknown germline . no 224 RORA
srip42517 chr15 83551627 83551627 - unknown germline . no 224 HOMER2
srip43247 chr15 100931152 100931152 - unknown germline . no 224 .
srip44525 chr16 27425933 27425933 - unknown germline . no 224 IL21R
srip45903 chr16 63480366 63480366 . unknown germline . no 224 .
srip46324 chr16 71028016 71028016 + unknown germline . no 224 HYDIN
srip46491 chr17 2102241 2102241 + unknown germline . no 224 SMG6
srip46531 chr17 6341639 6341639 - unknown germline . no 224 .
srip47012 chr17 25303543 25303543 . unknown germline . no 224 .
srip47194 chr17 28398310 28398310 + unknown germline . no 224 EFCAB5
srip47927 chr17 40565600 40565600 . unknown germline . no 224 PTRF
srip52392 chr19 42340374 42340374 . unknown germline . no 224 .
srip52779 chr2 7050600 7050600 + unknown germline . no 224 .
srip53466 chr2 23191008 23191008 - unknown germline . no 224 .
srip57856 chr2 133033413 133033413 . unknown germline . no 224 .
srip57858 chr2 133034594 133034594 . unknown germline . no 224 .
srip59202 chr2 147020925 147020925 + unknown germline . no 224 .
srip61931 chr2 221278227 221278227 - unknown germline . no 224 .
srip62121 chr2 221503759 221503759 - unknown germline . no 224 .
srip62365 chr2 230341561 230341561 + unknown germline . no 224 DNER
srip64768 chr20 41952105 41952105 - unknown germline . no 224 .
srip65868 chr21 19517305 19517305 - unknown germline . no 224 .
srip67854 chr22 22715595 22715595 + unknown germline . no 224 IGL@
srip68748 chr22 44324597 44324597 - unknown germline . no 224 PNPLA3
srip71900 chr3 38626071 38626071 + unknown germline . no 224 SCN5A
srip72707 chr3 55788574 55788574 + unknown germline . no 224 ERC2
srip73376 chr3 59852896 59852896 + unknown germline . no 224 FHIT
srip74857 chr3 82144861 82144861 - unknown germline . no 224 .
srip75282 chr3 84593281 84593281 + unknown germline . no 224 .
srip75583 chr3 85576556 85576556 + unknown germline . no 224 CADM2
srip75846 chr3 88353502 88353502 . unknown germline . no 224 .
srip77236 chr3 123590719 123590719 + unknown germline . no 224 MYLK
srip78650 chr3 151148549 151148549 - unknown germline . no 224 MED12L
srip80029 chr3 173917220 173917220 - unknown germline . no 224 NLGN1
srip80235 chr3 175677977 175677977 - unknown germline . no 224 .
srip80847 chr3 181192836 181192836 + unknown germline . no 224 .
srip81481 chr3 186372132 186372132 + unknown germline . no 224 .
srip82123 chr3 193354172 193354172 - unknown germline . no 224 OPA1
srip82994 chr4 18162684 18162684 - unknown germline . no 224 .
srip84050 chr4 37952113 37952113 - unknown germline . no 224 TBC1D1
srip84705 chr4 47007787 47007787 - unknown germline . no 224 .
srip85386 chr4 57497061 57497061 - unknown germline . no 224 .
srip85491 chr4 58126670 58126670 - unknown germline . no 224 .
srip85762 chr4 58917522 58917522 - unknown germline . no 224 .
srip87337 chr4 80768529 80768529 + unknown germline . no 224 GDEP
srip90356 chr4 115132699 115132699 + unknown germline . no 224 .
srip90711 chr4 118765257 118765257 + unknown germline . no 224 .
srip92207 chr4 134596423 134596423 + unknown germline . no 224 .
srip92800 chr4 138177329 138177329 + unknown germline . no 224 .
srip93738 chr4 157447968 157447968 + unknown germline . no 224 .
srip94635 chr4 174035603 174035603 + unknown germline . no 224 .
srip95380 chr4 190659701 190659701 + unknown germline . no 224 .
srip96068 chr5 8749521 8749521 + unknown germline . no 224 .
srip96289 chr5 11391269 11391269 + unknown germline . no 224 CTNND2
srip97732 chr5 33633341 33633341 - unknown germline . no 224 ADAMTS12
srip100736 chr5 89450775 89450775 + unknown germline . no 224 .
srip103596 chr5 135023720 135023720 . unknown germline . no 224 .
srip105728 chr5 160435672 160435672 - unknown germline . no 224 .
srip105913 chr5 168757136 168757136 - unknown germline . no 224 .
srip107514 chr6 13503042 13503042 + unknown germline . no 224 .
srip108985 chr6 57494139 57494139 - unknown germline . no 224 PRIM2
srip110672 chr6 77379930 77379930 - unknown germline . no 224 .
srip110908 chr6 77980644 77980644 - unknown germline . no 224 .
srip112041 chr6 91669514 91669514 - unknown germline . no 224 .
srip112690 chr6 102283763 102283763 - unknown germline . no 224 GRIK2
srip113385 chr6 124937606 124937606 - unknown germline . no 224 NKAIN2
srip113805 chr6 142450105 142450105 - unknown germline . no 224 .
srip114423 chr6 148163577 148163577 + unknown germline . no 224 .
srip116121 chr7 8019019 8019019 + unknown germline . no 224 GLCCI1
srip116433 chr7 22684527 22684527 - unknown germline . no 224 .
srip116820 chr7 39852162 39852162 + unknown germline . no 224 .
srip118292 chr7 62492938 62492938 + unknown germline . no 224 .
srip118893 chr7 70188685 70188685 - unknown germline . no 224 AUTS2
srip119827 chr7 84901724 84901724 - unknown germline . no 224 .
srip120240 chr7 85044743 85044743 + unknown germline . no 224 .
srip121093 chr7 105741898 105741898 . unknown germline . no 224 SYPL1
srip121744 chr7 107829256 107829256 + unknown germline . no 224 NRCAM
srip122019 chr7 108325670 108325670 + unknown germline . no 224 .
srip122260 chr7 110484750 110484750 + unknown germline . no 224 IMMP2L
srip124371 chr8 5829282 5829282 - unknown germline . no 224 .
srip125434 chr8 24926547 24926547 - unknown germline . no 224 .
srip125673 chr8 33736441 33736441 - unknown germline . no 224 .
srip125696 chr8 36088606 36088606 - unknown germline . no 224 .
srip126330 chr8 57161903 57161903 + unknown germline . no 224 .
srip126604 chr8 65578125 65578125 - unknown germline . no 224 CYP7B1
srip127578 chr8 75723729 75723729 + unknown germline . no 224 .
srip128269 chr8 87315042 87315042 + unknown germline . no 224 .
srip128459 chr8 92186274 92186274 - unknown germline . no 224 LRRC69
srip129135 chr8 115788572 115788572 - unknown germline . no 224 .
srip129410 chr8 115881775 115881775 + unknown germline . no 224 .
srip132564 chr9 30674459 30674459 - unknown germline . no 224 .
srip132870 chr9 32092744 32092744 - unknown germline . no 224 .
srip133390 chr9 32463890 32463890 - unknown germline . no 224 DDX58
srip133622 chr9 34904794 34904794 - unknown germline . no 224 .
srip135871 chr9 118083873 118083873 - unknown germline . no 224 DEC1
srip137252 chrX 54917144 54917144 + unknown germline . no 224 .
srip141077 chrX 122664864 122664864 - unknown germline . no 224 .
srip141375 chrX 129525275 129525275 - unknown germline . no 224 .
srip142256 chrY 10016651 10016651 - unknown germline . no 224 .